prerakmody

General Coding Instructions

1. Response Structure & Workflow

• Every response must follow this specific sequence:
  • File Hierarchy: Provide a visual tree of the file structure and a one-line description for each file involved.
  • Class & Inheritance (if applicable): Briefly explain the inheritance structure and how files relate to one another.
  • The Code Implementation: (See "Code Formatting" for style rules).
  • Summary of Changes: A concise list of what was modified or added.
  • Execution Commands: Provide the specific PowerShell command to run the script and a JSON code block for the VSCode launch.json configuration.
• Agent Learnings: A section titled "Learnings & Improvements" summarizing logic hurdles or prompt refinements for future sessions.

prerakmody

import os
import subprocess
import sys
import site
import shutil
from pathlib import Path

# Find the Magika models directory
def find_magika_models():
    try:

prerakmody

# >>> conda initialize >>>
CONDA_BASE_PATH="/<path>/to/anaconda3}" # make sure to include ananconda3 or miniconda3 in this path

__conda_setup="$("${CONDA_BASE_PATH}/bin/conda" 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
    eval "$__conda_setup"
else
    if [ -f "${CONDA_BASE_PATH}/etc/profile.d/conda.sh" ]; then
        . "${CONDA_BASE_PATH}/etc/profile.d/conda.sh"
    else

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{
    "version": "0.2.0",
    "configurations": [
        {
            "name": "Python: cupdate",
            "type": "debugpy",
            "request": "launch",
            "python": "C:\\Users\\Prerak\\AppData\\Local\\miniconda3\\python.exe",
            "program": "C:\\Users\\Prerak\\Documents\\file.py",
            "args": [

prerakmody

1. 3D Slicer is often installed in C:\Users\<username>\AppData\Local\slicer.org\Slicer.x.y
   • within this folder checkout slicer.org\Slicer-ABCDE (a configuration file)

[Extensions]
LastServerAPI=Girder_v1
ManagerEnabled=true
ServerUrl=https://slicer-packages.kitware.com
FrontendServerUrl=https://extensions.slicer.org
InstallPath=slicer.org/Extensions-33241

prerakmody

1. Powershell vs git-bash on windows
   • ls vs dir, ...
2. Learn unix commands
   • cd, ls, ls -l, .bashrc (for alias), ln -s
3. Learng git commands
   • git status, git commit, git push, git branch
4. Learn how to setup SSH keys
   • ssh-keygen, setting keys in web UI of git (github, gitlab, bitbucket etc) system, .ssh/authorized_keys
5. VSCode/Pycharm setup

• debugger

prerakmody

1. Status/Start/Restart
   • systemctl {status, start, stop, restart} docker.service
2. Cleanup cache
   • docker system prune -a
3. Config
   • sudo vim /etc/default/docker
4. docker0 interface
   • ifconfig | grep docker0 (docker0 is Docker's bridge network)
   • Only if firewalls are installed

• First: check for all services: sudo systemctl list-units --type=service

prerakmody

#!/bin/bash
#SBATCH --job-name=<script-name>
#SBATCH --partition=highmemgpu
#SBATCH --gres=gpu:1
#SBATCH --nodelist=res-hpc-gpu08
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=11
#SBATCH --mem-per-cpu=8G
#SBATCH --time=14-20:00:00
#SBATCH --mail-type=end

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1 - Install gping

0. Launch Powershell in Administrator mode
1. First install chocolatey
2. Install gping: choco install gping

1.1 - Sample command

• gping google.com reddit.com <local-server>

2 - Make it a powershell alias

1. notepad $PROFILE

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"""
>> pip install uv # OR https://docs.astral.sh/uv/getting-started/installation/
>> uv run -p 3.11 uv-monai-torchsummary.py
"""

# /// script
# requires-python = ">=3.11"
# dependencies = [
#     "monai==1.3.2",
#     "torchsummary==1.5.1",