20200303_dag_json_diff

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diff -r master/cms004/experimental.json tiago/cms004/experimental.json
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diff -r master/cms004/host_filter.json tiago/cms004/host_filter.json
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<       "s3_dir": "s3://idseq-samples-development/samples/406/14224/fastqs",
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diff -r master/cms004/non_host_alignment.json tiago/cms004/non_host_alignment.json
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diff -r master/cms004/postprocess.json tiago/cms004/postprocess.json
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<   "output_dir_s3": "s3://idseq-samples-development/samples/406/14224/postprocess",
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<       "s3_dir": "s3://idseq-samples-development/samples/406/14224/results/3.19"
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<       "s3_dir": "s3://idseq-samples-development/samples/406/14224/results/3.19"
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>       "s3_dir": "s3://idseq-samples-development/samples/407/14227/results/3.19"
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diff -r master/echo/experimental.json tiago/echo/experimental.json
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<       "nonhost_R1.fasta",
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>       "nonhost_R1.fastq",
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diff -r master/echo/host_filter.json tiago/echo/host_filter.json
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<   "output_dir_s3": "s3://idseq-samples-development/samples/406/14225/results",
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<       "EchoExp2_H2O_1x_S9_R1_001.fa",
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<       "valid_input1.fasta",
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>       "valid_input1.fastq",
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<       "unmapped1.fasta",
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>       "trimmomatic1.fastq",
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<         "file_ext": "fasta"
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<       "s3_dir": "s3://idseq-samples-development/samples/406/14225/fastqs",
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diff -r master/echo/non_host_alignment.json tiago/echo/non_host_alignment.json
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diff -r master/echo/postprocess.json tiago/echo/postprocess.json
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diff -r master/norg17/experimental.json tiago/norg17/experimental.json
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diff -r master/norg17/host_filter.json tiago/norg17/host_filter.json
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diff -r master/norg17/non_host_alignment.json tiago/norg17/non_host_alignment.json
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diff -r master/norg17/postprocess.json tiago/norg17/postprocess.json
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<   "output_dir_s3": "s3://idseq-samples-development/samples/405/14222/postprocess",
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diff -r master/rr004/experimental.json tiago/rr004/experimental.json
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diff -r master/rr004/host_filter.json tiago/rr004/host_filter.json
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diff -r master/rr004/non_host_alignment.json tiago/rr004/non_host_alignment.json
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diff -r master/rr004/postprocess.json tiago/rr004/postprocess.json
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